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Essential Guide to Reading ­Biomedical Papers
Recognising and Interpreting Best Practice
By Philip D. Langton (Edited by)

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Format
Paperback, 352 pages
Other Formats Available

Hardback : £111.00

Published
United States, 23 November 2012

Essential Guide to Reading Biomedical Papers: Recognising and Interpreting Best Practice is an indispensable companion to the biomedical literature. This concise, easy-to-follow text gives an insight into core techniques and practices in biomedical research and how, when and why a technique should be used and presented in the literature. Readers are alerted to common failures and misinterpretations that may evade peer review and are equipped with the judgment necessary to be properly critical of the findings claimed by research articles. This unique book will be an invaluable resource for students, technicians and researchers in all areas of biomedicine. * Allows the reader to develop the necessary skills to properly evaluate research articles * Coverage of over 30 commonly-used techniques in the biomedical sciences * Global approach and application, with contributions from leading experts in diverse fields


List of contributors ix Foreword xi Preface xiii Acknowledgements xvii Introduction xix Section A - Basic principles 1 1 Philosophy of science 3 James Ladyman 2 Ingredients of experimental design 9 Nick Colegrave 3 Statistics: a journey that needs a guide 17 Gordon Drummond Section B - Cell and molecular 27 4 Organ bath pharmacology 29 Emma Robinson 5 Small vessel myography 39 Tomoko Kamishima and John M Quayle 6 Mammalian cell cultures: the example of airway epithelial cell cultures for cystic fibrosis research 49 Scott H Randell 7 Electron microscopy (TEM and SEM) 59 Paul Verkade 8 Fluorescence microscopy 67 Mark Jepson 9 Intracellular 'sharp' microelectrode recording 77 Helena C Parkington and Harold A Coleman 10 Single electrode voltage-clamp (SEVC) 85 Harold A Coleman and Helena C Parkington 11 Patch clamp recording 95 Neil Bannister and Phil Langton 12 Production of antibodies 105 Elek Molnar 13 Immunocytochemistry and immunohistochemistry 117 Elek Molnar 14 Immunoprecipitation (IP) 129 David Bates 15 Immunoblotting (western) 137 Samantha F. Moore, Joshua S. Savage and Ingeborg Hers 16 Applications of green fluorescent protein (GFP) 147 Mark Jepson 17 Fluorescent measurement of ion activity in cells 153 Helen Kennedy 18 Detection of exocytosis - real time 163 Anja Teschemacher 19 Viral vector transgenesis 173 Anja Teschemacher 20 Polymerase chain reaction (PCR) and reverse transcription (RT)-PCR 179 Lucy F. Donaldson 21 In situ hybridisation (ISH) 187 Lucy F. Donaldson 22 Methods of interference (antisense, siRNAs and dominant negative mutations) 193 Allison Fulford 23 Transcriptome analysis: microarrays 203 Charles Hindmarch 24 Experimental proteomics 215 Thierry Le Bihan Section C - In vivo / integrative 229 25 Behavioural methodology 231 Emma Robinson 26 Genetically modified mouse models 241 Nina Balthasar 27 Wireless recording of cardiovascular signals 247 Julian FR Paton and Fiona D McBryde 28 Electrical stimulation methods 253 Jon Wakerley 29 Extracellular recording 261 Jon Wakerley 30 Antidromic identification 271 Jon Wakerley 31 Event-triggered averaging, including spike-triggered averaging 279 Richard Apps 32 Axonal transport tracing of CNS pathways 285 John Crabtree 33 Cardiovascular methods: general considerations for human studies 291 Erica A Wehrwein and Michael J Joyner 34 Measuring cardiac output in humans 299 Erica A Wehrwein and Michael J Joyner 35 Measuring peripheral blood flow in humans 311 Erica A Wehrwein and Michael J Joyner Index 319

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Essential Guide to Reading Biomedical Papers: Recognising and Interpreting Best Practice is an indispensable companion to the biomedical literature. This concise, easy-to-follow text gives an insight into core techniques and practices in biomedical research and how, when and why a technique should be used and presented in the literature. Readers are alerted to common failures and misinterpretations that may evade peer review and are equipped with the judgment necessary to be properly critical of the findings claimed by research articles. This unique book will be an invaluable resource for students, technicians and researchers in all areas of biomedicine. * Allows the reader to develop the necessary skills to properly evaluate research articles * Coverage of over 30 commonly-used techniques in the biomedical sciences * Global approach and application, with contributions from leading experts in diverse fields


List of contributors ix Foreword xi Preface xiii Acknowledgements xvii Introduction xix Section A - Basic principles 1 1 Philosophy of science 3 James Ladyman 2 Ingredients of experimental design 9 Nick Colegrave 3 Statistics: a journey that needs a guide 17 Gordon Drummond Section B - Cell and molecular 27 4 Organ bath pharmacology 29 Emma Robinson 5 Small vessel myography 39 Tomoko Kamishima and John M Quayle 6 Mammalian cell cultures: the example of airway epithelial cell cultures for cystic fibrosis research 49 Scott H Randell 7 Electron microscopy (TEM and SEM) 59 Paul Verkade 8 Fluorescence microscopy 67 Mark Jepson 9 Intracellular 'sharp' microelectrode recording 77 Helena C Parkington and Harold A Coleman 10 Single electrode voltage-clamp (SEVC) 85 Harold A Coleman and Helena C Parkington 11 Patch clamp recording 95 Neil Bannister and Phil Langton 12 Production of antibodies 105 Elek Molnar 13 Immunocytochemistry and immunohistochemistry 117 Elek Molnar 14 Immunoprecipitation (IP) 129 David Bates 15 Immunoblotting (western) 137 Samantha F. Moore, Joshua S. Savage and Ingeborg Hers 16 Applications of green fluorescent protein (GFP) 147 Mark Jepson 17 Fluorescent measurement of ion activity in cells 153 Helen Kennedy 18 Detection of exocytosis - real time 163 Anja Teschemacher 19 Viral vector transgenesis 173 Anja Teschemacher 20 Polymerase chain reaction (PCR) and reverse transcription (RT)-PCR 179 Lucy F. Donaldson 21 In situ hybridisation (ISH) 187 Lucy F. Donaldson 22 Methods of interference (antisense, siRNAs and dominant negative mutations) 193 Allison Fulford 23 Transcriptome analysis: microarrays 203 Charles Hindmarch 24 Experimental proteomics 215 Thierry Le Bihan Section C - In vivo / integrative 229 25 Behavioural methodology 231 Emma Robinson 26 Genetically modified mouse models 241 Nina Balthasar 27 Wireless recording of cardiovascular signals 247 Julian FR Paton and Fiona D McBryde 28 Electrical stimulation methods 253 Jon Wakerley 29 Extracellular recording 261 Jon Wakerley 30 Antidromic identification 271 Jon Wakerley 31 Event-triggered averaging, including spike-triggered averaging 279 Richard Apps 32 Axonal transport tracing of CNS pathways 285 John Crabtree 33 Cardiovascular methods: general considerations for human studies 291 Erica A Wehrwein and Michael J Joyner 34 Measuring cardiac output in humans 299 Erica A Wehrwein and Michael J Joyner 35 Measuring peripheral blood flow in humans 311 Erica A Wehrwein and Michael J Joyner Index 319

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Product Details
EAN
9781119959977
ISBN
1119959977
Dimensions
24.4 x 16.5 x 1.8 centimeters (0.47 kg)

Table of Contents

List of contributors ix

Foreword xi

Preface xiii

Acknowledgements xvii

Introduction xix

Section A - Basic principles 1

1 Philosophy of science 3
James Ladyman

2 Ingredients of experimental design 9
Nick Colegrave

3 Statistics: a journey that needs a guide 17
Gordon Drummond

Section B - Cell and molecular 27

4 Organ bath pharmacology 29
Emma Robinson

5 Small vessel myography 39
Tomoko Kamishima and John M Quayle

6 Mammalian cell cultures: the example of airway epithelial cell cultures for cystic fibrosis research 49
Scott H Randell

7 Electron microscopy (TEM and SEM) 59
Paul Verkade

8 Fluorescence microscopy 67
Mark Jepson

9 Intracellular 'sharp' microelectrode recording 77
Helena C Parkington and Harold A Coleman

10 Single electrode voltage-clamp (SEVC) 85
Harold A Coleman and Helena C Parkington

11 Patch clamp recording 95
Neil Bannister and Phil Langton

12 Production of antibodies 105
Elek Molnar

13 Immunocytochemistry and immunohistochemistry 117
Elek Molnar

14 Immunoprecipitation (IP) 129
David Bates

15 Immunoblotting (western) 137
Samantha F. Moore, Joshua S. Savage and Ingeborg Hers

16 Applications of green fluorescent protein (GFP) 147
Mark Jepson

17 Fluorescent measurement of ion activity in cells 153
Helen Kennedy

18 Detection of exocytosis – real time 163
Anja Teschemacher

19 Viral vector transgenesis 173
Anja Teschemacher

20 Polymerase chain reaction (PCR) and reverse transcription (RT)-PCR 179
Lucy F. Donaldson

21 In situ hybridisation (ISH) 187
Lucy F. Donaldson

22 Methods of interference (antisense, siRNAs and dominant negative mutations) 193
Allison Fulford

23 Transcriptome analysis: microarrays 203
Charles Hindmarch

24 Experimental proteomics 215
Thierry Le Bihan

Section C - In vivo / integrative 229

25 Behavioural methodology 231
Emma Robinson

26 Genetically modified mouse models 241
Nina Balthasar

27 Wireless recording of cardiovascular signals 247
Julian FR Paton and Fiona D McBryde

28 Electrical stimulation methods 253
Jon Wakerley

29 Extracellular recording 261
Jon Wakerley

30 Antidromic identification 271
Jon Wakerley

31 Event-triggered averaging, including spike-triggered averaging 279
Richard Apps

32 Axonal transport tracing of CNS pathways 285
John Crabtree

33 Cardiovascular methods: general considerations for human studies 291
Erica A Wehrwein and Michael J Joyner

34 Measuring cardiac output in humans 299
Erica A Wehrwein and Michael J Joyner

35 Measuring peripheral blood flow in humans 311
Erica A Wehrwein and Michael J Joyner

Index 319

About the Author

Dr. Philip David Langton, Senior Lecturer and Academic Director of E-Learning, Department of Physiology, University of Bristol
Dr Philip Langton is currently a Senior Lecturer and Academic Director of e-Learning in the Faculty of Medical and Veterinary Sciences at the University of Bristol, UK.?Dr Langton is an advocate for excellence in all forms of learning, teaching and assessment in HE. He is an enthusiastic undergraduate and graduate teacher, contributing to Medical Sciences and Physiological Sciences programmes. Finalist of 'Bioscience Teacher of the Year' for 2011, Dr Langton is passionate about providing an excellent learning experience for students in ways that are stimulating and rewarding for University staff, and disseminating innovative and high-quality learning practices.

Reviews

The book would be of most benefit to new researchers orearly career scientists though with some benefits to the moreexperienced scientist moving into a new discipline. (Microbiology Today, 1 September 2013) As a guide to how to properly ask questions of life andhow to interpret its often-enigmatic answers, this book is a mustread. Summing Up: Highly recommended. Upper-divisionundergraduates, graduate students, researchers/faculty, andprofessionals. (Choice, 1 August 2013) Too many recent bioscience graduates lack significantresearch lab experience. Even research projects can expose them tojust a few techniques. Appraisal of research papers inundergraduate courses tends to address the results, but rarelyincludes a critical evaluation of the researchers methodology. Inreality, few bioscientists can claim a working knowledge of morethan a handful of the techniques covered in this collection. These shortcomings can be greatly overcome thanks to this book.The contributors are active research scientists of high quality.Each addresses the methods in a critical sense and provide anexpert's view of the advantages and pitfalls. There is noequivalent book currently available. Dr David J. Miller onbehalf of The Physiological Society Research questions require the scientist to employmolecular, cell, organism and population approaches, and the readerof scientific literature to carefully consume data from each ofthose environments. This book provides a clear and concisesummary of the research techniques and approaches that generatedata. Importantly, the authors identify appropriate uses andcautionary caveats, essential for readers who do not use thetechnique. This book is essential for accurate and carefulinterpretation of scientific literature. Professor Robert G.Carroll, Editor Advances in Physiology Education

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